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Identification and Tissue Localization of Olfactory Proteins in the Antenna and Head of Glossina Species

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dc.contributor.author Nyanjom, Steven Reuben Ger
dc.date.accessioned 2019-03-07T07:45:45Z
dc.date.available 2019-03-07T07:45:45Z
dc.date.issued 2011
dc.identifier.uri http://hdl.handle.net/123456789/889
dc.description A thesis submitted in fulfilment for the Degree of Doctor of Philosophy in Biochemistry and Molecular Biology in the Jomo Kenyatta University of Agriculture and Technology en_US
dc.description.abstract Tsetse flies use olfaction in search for food, mates and larviposition sites. Olfactory proteins [(odorant binding proteins (OBPs), pheromone binding proteins (PBPs), chemosensory protein (CSPs), odorant degrading enzymes (ODEs) and odorant receptors (Ors)], located within the antennae, play key role in this process. In this work, presence of olfactory proteins was investigated by constructing and sequencing cDNA libraries from Glossina pallidipes Austen, antennae; Glossina palpalis gambiensis Vanderplank, head and Glossina tachinoides Westwood, head. The Expressed sequence tags (ESTs) were clustered using cDNA Annotation™ Software (CAS) and annotated by blast searches. ESTs were generated from the antenna! (1127) and head (906 for G. p. gambiensis and 830 for G. tachinoides) libraries, composed of 296 clusters (18 contigs and 278 singletons for G. pallidipes antennae), 305 clusters (36 contigs and 269 singletons for G. p. gambiensis head) and 232 clusters (54 contigs and 178 singletons for G. tachinoides). The analyses implicated ten (10) sequences in olfaction (2 OBPs from G. pallidipes, 5 OBPs from G. p. gambiensis, 2 OBPs and 1 CSP from G. tachinoides). Clustal alignment revealed a diverse multigene family while phylogenetic analysis supports the existence of different olfactory protein subfamilies. To identify Dipteran orthologs, the three Glossina ESTs (G. pallidipes antennae, G p. gambiensis head and G. tachinoides head) were clustered using StackP ACK then compared to G. morsitans morsitans, Drosophila melanogaster, Anopheles gambiae, Aedes aegypti and Cul ex quinquef asciatus proteomes. A total of 663 clusters for G. pallidipes (45 contigs and 618 singletons), 930 clusters for G. p. gambiensis (43 contigs and 387 singletons) and 444 clusters for G. tachinoides (40 contigs and 404 singletons) were generated. Nine putative OBPs (G. pallidipes: 2, G. p, gambiensis: 5, G. tachinoides: 2) and one putative CSP (G. tachinoides) were identified by BLAST search against the dipteran protein databases. Multiple sequence alignments revealed a diverse OBP gene family and a conserved CSP. Phylogenetic analysis revealed a closely related multigene family that could have evolved separately along different evolutionary time. Reverse Transcription Polymerase Chain Reaction (RT-PCR) screening of male and female G. pallidipes tissues (antennae, head, thorax and abdomen) for presence of OBPs and CSPs homologs identified in G. pallidipes, G. tachinoides and G. p. gambiensis, and similar ones (putative OBPs from G. m. morsitans), revealed 7 none sex specific (tissue dependent), and 2 sex (male) specific G. m morsitans OBP homologues, one specific to the thorax tissue (Gmm_cn14014) and the other to both thorax and abdomen tissues (Gmm_GLAAS20TVB). Two putative OBPs identified in G. pallidipes and G. p. gambiensis (Gpacontig266 and Gphcontigl 84) were localised to the antennae tissue. Alignment of the sequenced amplicons revealed a diverse OBP and conserved CSP gene families. These results indicates that olfactory process in tsetse is a complex and interactive process involving established olfactory and non olfactory tissues, suggesting that tissues, other than antennae should also be targeted/considered in development of novel odor based technologies for tsetse control. en_US
dc.description.sponsorship International Centre of Insect Physiology and Ecology (icipe), Netherlands SII Programme and WHO en_US
dc.publisher Jomo Kenyatta University of Agriculture and Technology en_US
dc.rights Attribution-NonCommercial-ShareAlike 3.0 United States *
dc.rights.uri http://creativecommons.org/licenses/by-nc-sa/3.0/us/ *
dc.subject Olfactory en_US
dc.subject Glossina Species en_US
dc.title Identification and Tissue Localization of Olfactory Proteins in the Antenna and Head of Glossina Species en_US
dc.type Thesis en_US


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